ArrayCluster

An Analytic Tool for Clustering, Data Visualization and Module Detector on Gene Expression Profiling

Welcome to the ArrayCluster's website !

The ArrayCluster is a freely available software to perform the mixed factors analysis of microarray gene expression data. The mixed factors analysis that we originally proposed in Yoshida et al. (2004) provides us an integrated analytic tool for clustering DNA microarray experiments on the basis of more than several thousands genes, a data compression system and an automatic detector of module transcriptional genes that are relevant to the calibrated clusters (molecular subtypes).

This site provides installation and a more detailed description of the ArrayCluster. An brief introduction of the mixed factors analysis and some technical guides (online manual) are also provided. Current version 1.0 is executable for Windows only.



This work was carried out in the laboratory of Tomoyuki Higuchi, The Institute of Statistical Mathematics, Research Organization of Information and Systems, and the laboratory of Satoru Miyano, DNA Information Analysis, Human Genome Center, Institute of Medical Science, University of Tokyo.

Developers; Tomoyuki Higuchi, Ryo Yoshida, Seiya Imoto, Satoru Miyano
Copyright; (C) 2005- Tomoyuki Higuchi (C) 2005- Ryo Yoshida (C) 2005- Seiya Imoto (C) 2005- Satoru Miyano (C) 2005- The Institute of Statistical Mathematics, Research Organization of Information and Systems (C) 2005- Human Genome Center, Institute of Medical Science, University of Tokyo