Software
R Packages Available on CRAN
- boutliers : Outlier detection and influence diagnostics for meta-analysis. Version 1.1-2, May 2023.
- PINMA : Improved methods for constructing prediction intervals in network meta-analysis. Version 1.1-2, May 2023.
- robustmeta : Robust inference for meta-analysis with influential outlying studies. Version 1.1-1, July 2022.
- dmetatools : Computational tools for meta-analysis of diagnostic accuracy studies. Version 1.1-1, May 2023.
- MVPBT : Publication-bias tests for meta-analysis of diagnostic accuracy studies. Version 1.1-1, May 2023.
- NMA : Network meta-analysis based on multivariate meta-analysis models. Version 1.4-1, December 2023.
- rqlm : Modified Poisson and least-squares regressions for binary outcomes. Version 1.2-1, January 2024.
- survNMA : Network meta-analysis combining survival and count outcomes. Version 1.1-1, January 2025.
- TTE : Design and analysis tools for target trial emulation. Version 1.1-1, July 2026.
Statistical Analysis Programs and Example Code
-
R code for “Noma, H. (2011). Confidence intervals for a random-effects meta-analysis based on Bartlett-type corrections.
Statistics in Medicine
30: 3304–3312.”
R package Vignettes -
Takai, K., Hoshino, T., and Noma, H. (2016).
The Statistical Science of Missing Data: Applications in Medicine and the Social Sciences
[in Japanese]
. Tokyo: Iwanami Shoten.
Datasets and code examples [website in Japanese] -
Statistical Analysis of Nested Case-Control and Case-Cohort Studies Using R
[in Japanese]
(Epidemiology Seminar, 27th Annual Meeting of the Japan Epidemiological Association, January 7, 2017)
R code examples -
Multiple Imputation by Chained Equations (MICE): R example code using the
micepackage (Biostatistics Seminar, National Cancer Center Japan, January 2017; the example ovarian-cancer dataset can be downloaded here ; January 14, 2017). - Discrimination and Calibration Methods for Logistic Regression: R example code (2018 Biometric Seminar of the Biometric Society of Japan; the example dataset can be downloaded here ; November 2, 2018).
- Discrimination and Calibration Methods for Cox Regression: R example code (2018 Biometric Seminar of the Biometric Society of Japan; the example dataset can be downloaded here ; November 2, 2018).
- R example code for the predboot package (May 15, 2020).
- R example code for the dmetatools package (September 13, 2022).
- R example code for the MVPBT package (September 16, 2022).
- R example code for the NMA package (July 6, 2023).
- R example code for Bayesian meta-analysis using OpenBUGS (2023 Biometric Seminar of the Biometric Society of Japan; December 14, 2023).
- R example code for the rqlm package . Tutorial [in Japanese] (January 23, 2025).
- R example code for the survNMA package (January 30, 2025).