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MOLPHY: A Computer Program Package for Molecular Phylogenetics

This is the MOLPHY (ProtML) distribution, version 2.3.
Copyright (c) 1992-1996, Jun Adachi & Masami Hasegawa.
All rights reserved.
MOLPHY is a program package for MOLecular PHYlogenetics.

ProtML is a main program in MOLPHY for inferring evolutionary trees from PROTein (amino acid) sequences by using the Maximum Likelihood method.

Programs (C language)

Utilities (Perl)

MOLPHY is a free software, and you can use and redistribute it. The programs are written in a standard subset of C with UNIX-like OS. The utilities are written in the "Perl" (Ver.4.036) with UNIX-like OS. MOLPHY has been tested on SUN4's (cc & gcc with SUN-OS 4.1.3) and HP9000/700 (cc, c89 & gcc with HP-UX 9.05).
However, MOLPHY has NOT been tested on VAX, IBM-PC, and Macintosh.

NETWORK DISTRIBUTION ONLY: The latest version of MOLPHY is always available by anonymous ftp in 8000/ISMLIB/MOLPHY/.

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